dcsimg

Import Log for North American Flora

  • Started: December 15, 2021 19:05
  • Completed: 19:07:05.000
  • Failed: No.
  • Status: completed

Events (most recent first):

  • 19:06:40.000 (warns) Trait Publishing failed: At https://eol.org/data/n_am_flora/publish_traits.tsv @ position 37500529 - there's a field starting with a quote and whereas it ends that quote there seems to be characters in that field after that ending quote. That isn't supported. This is what I read: 'Artemisia neomexicana. A perennial, with a creeping rootstock ; stems about 5 dm. high, slightly floccose when young, soon glabrous, striate; leaves alternate, numerous, sessile, 3-7 cm. long, pinnately divided into few linear di""ii' FROM /usr/local/bundle/bundler/gems/neo4j-ruby-driver-fe5438fb945d/ffi/neo4j/driver/internal/handlers/response_handler.rb:38:in `check_summary_failure' << /app/lib/trait_bank/slurp.rb:545:in `merge_triple' << /app/lib/trait_bank/slurp.rb:432:in `block in load_csv_where' << /app/lib/trait_bank/slurp.rb:432:in `each' << /app/lib/trait_bank/slurp.rb:432:in `load_csv_where' << /app/lib/trait_bank/slurp.rb:329:in `block (2 levels) in load_csv'
  • 19:06:33.000 (warns) FAILED on build_nodes query (Trait), will re-try once...
  • 19:06:33.000 (warns) At https://eol.org/data/n_am_flora/publish_traits.tsv @ position 37500529 - there's a field starting with a quote and whereas it ends that quote there seems to be characters in that field after that ending quote. That isn't supported. This is what I read: 'Artemisia neomexicana. A perennial, with a creeping rootstock ; stems about 5 dm. high, slightly floccose when young, soon glabrous, striate; leaves alternate, numerous, sessile, 3-7 cm. long, pinnately divided into few linear di""ii'
  • 19:06:24.000 (warns) FAILED on build_nodes query (Page), will re-try once...
  • 19:06:24.000 (warns) At https://eol.org/data/n_am_flora/publish_traits.tsv @ position 37500529 - there's a field starting with a quote and whereas it ends that quote there seems to be characters in that field after that ending quote. That isn't supported. This is what I read: 'Artemisia neomexicana. A perennial, with a creeping rootstock ; stems about 5 dm. high, slightly floccose when young, soon glabrous, striate; leaves alternate, numerous, sessile, 3-7 cm. long, pinnately divided into few linear di""ii'
  • 19:05:51.000 (warns) Skipping reindexing. You should reindex soon.
  • 19:05:42.000 (warns) INCORRECT NUMBER OF ROWS DURING IMPORT OF contentsections: got 16993, expected 16993 (from /app/tmp/n_am_flora_content_sections.tsv)
  • 19:05:39.000 (warns) MISSING http://content.eol.org/data/n_am_flora/publish_references.tsv [404] (8 bytes); skipping
  • 19:05:39.000 (warns) MISSING http://content.eol.org/data/n_am_flora/publish_image_info.tsv [404] (8 bytes); skipping
  • 19:05:39.000 (warns) MISSING http://content.eol.org/data/n_am_flora/publish_attributions.tsv [404] (8 bytes); skipping
  • 19:05:39.000 (warns) MISSING http://content.eol.org/data/n_am_flora/publish_media.tsv [404] (8 bytes); skipping
  • 19:05:38.000 (warns) INCORRECT NUMBER OF ROWS DURING IMPORT OF articles: got 16991, expected 16993 (from /app/tmp/n_am_flora_articles.tsv)
  • 19:05:37.000 (warns) MISSING http://content.eol.org/data/n_am_flora/publish_vernaculars.tsv [404] (8 bytes); skipping
  • 19:05:36.000 (warns) MISSING http://content.eol.org/data/n_am_flora/publish_node_ancestors.tsv [404] (8 bytes); skipping
  • 19:05:36.000 (warns) INCORRECT NUMBER OF ROWS DURING IMPORT OF scientificnames: got 21588, expected 21588 (from /app/tmp/n_am_flora_scientific_names.tsv)
  • 19:05:34.000 (warns) MISSING http://content.eol.org/data/n_am_flora/publish_identifiers.tsv [404] (8 bytes); skipping
  • 19:05:33.000 (warns) INCORRECT NUMBER OF ROWS DURING IMPORT OF bibliographiccitations: got 16993, expected 16993 (from /app/tmp/n_am_flora_bibliographic_citations.tsv)
  • 19:05:33.000 (warns) INCORRECT NUMBER OF ROWS DURING IMPORT OF nodes: got 21588, expected 21588 (from /app/tmp/n_am_flora_nodes.tsv)
  • 19:05:30.000 (warns) MISSING http://content.eol.org/data/n_am_flora/publish_referents.tsv [404] (8 bytes); skipping
  • 19:05:30.000 (warns) All existing content has been destroyed for the resource.